PPDB

The Plant Proteome Database

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AT4G18430.1   RAB GTPase homolog A1E

Lab Annot. AtRABA1e (Rab GTPase homolog A1e); GTP binding
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G60860.1 11Arabidopsis thaliana1E-138216839358 (57)_
AT3G15060.1 11Arabidopsis thaliana6E-136216819352 (51)_
AT1G28550.1 11Arabidopsis thaliana2E-13121878917 (6)_
Os05g48980.1 7Oryza sativa2E-134214809322 (22)_
Os09g15790.1 7Oryza sativa1E-133214819214 (14)_
Os06g35814.1 7Oryza sativa2E-121216758952 (52)_
Zm00001eb343780_P001 agpv5Zea mays4E-13621482930 (0)_
GRMZM2G020661_P01 3.21Zea mays2E-134214809321 (21)_
Zm00001eb295910_P001 agpv5Zea mays2E-13421480930 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_14(1) AAA_16(1) AAA_22(1) ABC_tran(1) Arf(1) GTP_EFTU(1) Gtr1_RagA(1) MMR_HS
TargetP: Cytoplasm (Class 3 C0.068; M0.104; S0.293; _0.785)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 217 aa (-cTP 164)
Molecular Weight 24.33 kDA(-cTP )
PI 5.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1613Detail       Natural Senescence leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
21173025(root proteome)

Comparative Proteomics Data


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