PPDB

PPDB	The Plant Proteome Database

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AT4G18430.1 RAB GTPase homolog A1E

Lab Annot.

AtRABA1e (Rab GTPase homolog A1e); GTP binding
Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G60860.1 11 Arabidopsis thaliana 1E-138 216 83 93 58 (56) _
AT3G15060.1 11 Arabidopsis thaliana 6E-136 216 81 93 52 (51) _
AT1G28550.1 11 Arabidopsis thaliana 2E-131 218 78 91 7 (6) _
Os05g48980.1 7 Oryza sativa 2E-134 214 80 93 22 (22) _
Os09g15790.1 7 Oryza sativa 1E-133 214 81 92 14 (14) _
Os06g35814.1 7 Oryza sativa 2E-121 216 75 89 52 (52) _
Zm00001eb343780_P001 agpv5 Zea mays 4E-136 214 82 93 0 (0) _
GRMZM2G020661_P01 3.21 Zea mays 2E-134 214 80 93 30 (21) _
Zm00001eb295910_P001 agpv5 Zea mays 2E-134 214 80 93 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_14(1) AAA_16(1) AAA_22(1) ABC_tran(1) Arf(1) GTP_EFTU(1) Gtr1_RagA(1) MMR_HS
TargetP:	Cytoplasm (Class 3 C0.068; M0.104; S0.293; _0.785)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	217 aa (-cTP 164)
Molecular Weight	24.33 kDA(-cTP )
PI	5.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1450	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1613	Detail								Natural Senescence leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
21173025(root proteome)

Comparative Proteomics Data