PPDB

 The Plant Proteome Database

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AT4G18360.2   Aldolase-type TIM barrel family protein
Lab Annot. glycolate oxidase
Mapman: 1.2.2 PS.photorespiration.glycolate oxydase
Curated Location peroxisome (Pubmed: 21472859 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18360.4 11Arabidopsis thaliana03071001000 (0)_
AT4G18360.1 11Arabidopsis thaliana030710010042 (42)_
AT3G14420.1 11Arabidopsis thaliana031485931532 (991)_
Os03g57220.1 7Oryza sativa0312859269 (69)_
Os03g57220.2 7Oryza sativa0312859261 (61)_
Os07g05820.1 7Oryza sativa0313839242 (42)_
Zm00001eb070280_P001 agpv5Zea mays031282920 (0)M
v1_GRMZM2G076145_P02 4a53Zea mays031282920 (0)M
GRMZM5G853854_P04 3.21Zea mays031282921 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DHO_dh(2) DUF561(3) Dus(3) FMN_dh(1) Glu_synthase(1) His_biosynth(2) IMPDH(2) NM
TargetP: Cytoplasm (Class 2 C0.045; M0.174; S0.015; _0.905)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 314 aa (-cTP 279)
Molecular Weight 34.40 kDA(-cTP )
PI 7.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1596Detail        [A. thaliana]  
1876Detail       Total leaf [A. thaliana] total soluble wild-type
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2167Detail       leaf [A. thaliana] stroma Clp stromaP3 trap-strepII
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16
2193Detail        [A. thaliana] total soluble P3-strepII 26
2264Detail       leaf [A. thaliana] stroma Clp stromawild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 17951448(peroxisome (leaves))
18814325(cotyledons)
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data

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