PPDB

The Plant Proteome Database

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AT4G18120.1   A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML3 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML3 is the transcript with highest frequency of alternative splicing. Expression was detected during early embryo development (heart and torpedo stage); no accumulation was detected in vegetative and floral apices, as revealed by in situ hybridization.

Lab Annot. MEI2-like 3
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: nucleus15356386
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.10)
Links TAIR   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18120.2 10Arabidopsis thaliana07301001000 (0)C
AT1G29400.2 11Arabidopsis thaliana078251640 (0)_
AT1G29400.1 11Arabidopsis thaliana078251640 (0)_
Os02g48790.2 7Oryza sativa078446620 (0)C
Os02g48790.1 7Oryza sativa078446620 (0)C
Os02g48790.3 7Oryza sativa078446620 (0)C
Zm00001eb268420_P002 agpv5Zea mays076946600 (0)M
v1_GRMZM2G004455_P02 4a53Zea mays076946600 (0)M
v1_GRMZM2G004455_P01 4a53Zea mays076946600 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_2(1)
TargetP: Chloroplast (Class 3 C0.644; M0.104; S0.115; _0.240)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 730 aa (-cTP 715)
Molecular Weight 81.33 kDA(-cTP 79.61)
PI 5.79(-cTP 5.73)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help