PPDB

The Plant Proteome Database

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AT4G18040.1   eukaryotic translation initiation factor 4E

Lab Annot. RNA binding / translation initiation factor (EIF4E)
Mapman: 29.2.3 protein.synthesis.initiation
Curated Location nucleus (Pubmed: 15610358 )

TAIR curated location: nucleolus & nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G29550.1 11Arabidopsis thaliana7E-9424056690 (0)_
AT1G29590.1 11Arabidopsis thaliana7E-9324155700 (0)_
AT1G29590.2 10Arabidopsis thaliana7E-9224055700 (0)_
Os01g73880.1 7Oryza sativa2E-102225657724 (24)_
Os10g32970.1 7Oryza sativa4E-60166507125 (25)_
Os03g15590.1 7Oryza sativa5E-31154335513 (13)_
Zm00001eb137550_P001 agpv5Zea mays2E-10621069800 (0)_
GRMZM2G002616_P01 3.21Zea mays2E-10621069806 (6)_
v1_GRMZM2G002616_P01 4a53Zea mays2E-10621069807 (7)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: IF4E(1)
TargetP: Cytoplasm (Class 1 C0.088; M0.075; S0.104; _0.939)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 235 aa (-cTP 141)
Molecular Weight 26.52 kDA(-cTP )
PI 5.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2051Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2053Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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