PPDB

PPDB	The Plant Proteome Database

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AT4G17920.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G46650.1 11 Arabidopsis thaliana 3E-114 282 61 74 0 (0) _
AT2G35420.1 11 Arabidopsis thaliana 7E-47 266 37 50 0 (0) _
AT3G05200.1 11 Arabidopsis thaliana 2E-39 276 34 51 1 (1) S
Os09g29310.1 7 Oryza sativa 1E-36 293 31 45 0 (0) S
Os02g52210.1 7 Oryza sativa 5E-33 272 32 44 0 (0) M
Os02g52210.2 7 Oryza sativa 5E-33 272 32 44 0 (0) M
GRMZM2G082653_P01 3.21 Zea mays 5E-38 301 32 46 1 (1) _
Zm00001eb315600_P001 agpv5 Zea mays 5E-38 301 32 46 0 (0) _
v1_GRMZM2G082653_P01 4a53 Zea mays 5E-38 301 32 46 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_4(1) Rad50_zn_hook(2) RINGv(1) Rtf2(1) zf-ANAPC11(1) zf-C3H
TargetP:	Cytoplasm (Class 2 C0.049; M0.239; S0.053; _0.882)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	289 aa (-cTP 240)
Molecular Weight	33.24 kDA(-cTP )
PI	5.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data