PPDB

PPDB	The Plant Proteome Database

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AT4G17905.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17905.2 11 Arabidopsis thaliana 0 310 100 100 0 (0) S
AT3G03550.1 11 Arabidopsis thaliana 3E-52 298 39 54 0 (0) _
AT5G17600.1 11 Arabidopsis thaliana 5E-45 256 38 57 0 (0) _
Os02g46600.1 7 Oryza sativa 1E-51 226 44 60 0 (0) _
Os04g50100.1 7 Oryza sativa 1E-47 218 44 55 0 (0) _
Os02g57460.1 7 Oryza sativa 1E-25 148 35 54 0 (0) _
Zm00001eb072390_P001 agpv5 Zea mays 1E-44 205 43 56 0 (0) _
v1_GRMZM2G090279_P02 4a53 Zea mays 1E-44 205 43 56 0 (0) _
GRMZM2G090279_P01 3.21 Zea mays 1E-44 205 43 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) DUF485(1) FANCL_C(1) Prok-RING_1(2) RINGv(1) zf-ANAPC11(1) zf-C3H
TargetP:	Cytoplasm (Class 2 C0.056; M0.139; S0.027; _0.864)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	310 aa (-cTP 217)
Molecular Weight	34.43 kDA(-cTP )
PI	5.11(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data