PPDB

The Plant Proteome Database

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AT4G17895.1   ubiquitin-specific protease 20

Lab Annot. ubiquitin-specific protease 20 (UBP20)
Mapman: 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G46740.1 11Arabidopsis thaliana4E-15761248601 (1)C
AT5G46740.2 11Arabidopsis thaliana3E-12453146580 (0)_
AT5G57990.1 11Arabidopsis thaliana3E-5831336550 (0)C
Os02g46650.1 7Oryza sativa1E-6028844610 (0)_
Os02g55180.2 7Oryza sativa9E-5631536550 (0)_
Os02g55180.1 7Oryza sativa1E-5531636550 (0)_
v1_GRMZM2G091069_P01 4a53Zea mays8E-8635843590 (0)_
GRMZM2G091069_P01 3.21Zea mays8E-8635843590 (0)_
Zm00001eb187750_P001 agpv5Zea mays3E-8133244600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_C98(1) UCH(1) UCH_1(3)
TargetP: Chloroplast (Class 4 C0.669; M0.036; S0.110; _0.413)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 695 aa (-cTP 659)
Molecular Weight 78.63 kDA(-cTP 74.74)
PI 4.45(-cTP 4.48)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help