PPDB

The Plant Proteome Database

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AT4G17890.2   ARF-GAP domain 8

Lab Annot. AGD8 (ARF-GAP DOMAIN 8); DNA binding
Mapman: 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17890.1 11Arabidopsis thaliana038099996 (4)_
AT5G46750.1 11Arabidopsis thaliana0375778754 (28)_
AT2G35210.1 11Arabidopsis thaliana3E-14338360750 (0)_
Os10g42420.1 7Oryza sativa8E-15937061760 (0)_
Os03g63710.1 7Oryza sativa3E-153385577522 (22)_
Os03g63710.2 7Oryza sativa2E-13435655733 (3)_
Zm00001eb064850_P002 agpv5Zea mays3E-15538858740 (0)_
v1_GRMZM2G176612_P01 4a53Zea mays3E-15538858742 (2)_
GRMZM2G176612_P01 3.21Zea mays3E-155388587431 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArfGap(2)
TargetP: Cytoplasm (Class 3 C0.360; M0.022; S0.067; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 384 aa (-cTP 354)
Molecular Weight 41.41 kDA(-cTP )
PI 8.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help