PPDB

The Plant Proteome Database

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AT4G17890.1   ARF-GAP domain 8

Lab Annot. AGD8 (ARF-GAP DOMAIN 8); DNA binding
Mapman: 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17890.2 11Arabidopsis thaliana038099993 (3)_
AT5G46750.1 11Arabidopsis thaliana0408778748 (26)_
AT2G35210.1 11Arabidopsis thaliana2E-15640861760 (0)_
Os10g42420.1 7Oryza sativa5E-17740561770 (0)_
Os03g63710.1 7Oryza sativa1E-167419577522 (22)_
Os03g63710.2 7Oryza sativa1E-13435655733 (3)_
Zm00001eb064850_P003 agpv5Zea mays3E-16942259740 (0)_
v1_GRMZM2G176612_P02 4a53Zea mays3E-16942259744 (4)_
GRMZM2G176612_P02 3.21Zea mays3E-169422597434 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArfGap(2)
TargetP: Cytoplasm (Class 3 C0.360; M0.022; S0.067; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 413 aa (-cTP 383)
Molecular Weight 44.44 kDA(-cTP )
PI 8.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help