PPDB

 The Plant Proteome Database

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AT4G17790.1   SNARE associated Golgi protein family
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71940.1 11Arabidopsis thaliana4E-11323764830 (0)_
AT4G09580.1 11Arabidopsis thaliana6E-108237618116 (16)_
AT1G71940.2 11Arabidopsis thaliana2E-10521666840 (0)_
Os02g46660.1 7Oryza sativa2E-12623277880 (0)S
Os04g50216.1 7Oryza sativa1E-12323375870 (0)S
Os03g49700.1 7Oryza sativa8E-10423760820 (0)_
Zm00001eb072290_P001 agpv5Zea mays3E-12123375860 (0)S
GRMZM5G886913_P02 3.21Zea mays3E-12123375860 (0)S
GRMZM2G128078_P01 3.21Zea mays3E-12023374860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PRA1(2) SNARE_assoc(2)
TargetP: Cytoplasm (Class 1 C0.104; M0.026; S0.120; _0.970)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 264 aa (-cTP 229)
Molecular Weight 28.93 kDA(-cTP )
PI 6.57(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help