PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G17730.1 syntaxin of plants 23

Lab Annot.

SYP2 Gene
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17730.2 11 Arabidopsis thaliana 0 255 100 100 0 (0) M
AT5G46860.1 11 Arabidopsis thaliana 6E-137 245 81 86 39 (34) M
AT5G16830.1 11 Arabidopsis thaliana 4E-98 247 60 78 0 (0) C
Os01g15110.1 7 Oryza sativa 2E-110 246 67 76 3 (3) _
Os02g47440.1 7 Oryza sativa 6E-68 249 51 67 0 (0) M
Os06g11930.1 7 Oryza sativa 7E-43 250 39 56 0 (0) _
GRMZM2G017329_P01 3.21 Zea mays 3E-108 248 66 77 11 (11) _
Zm00001eb333570_P001 agpv5 Zea mays 3E-108 248 66 77 0 (0) _
v1_GRMZM2G017329_P01 4a53 Zea mays 3E-108 248 66 77 4 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1664(4) MCPsignal(2) SNARE(1) Syntaxin(2) Syntaxin_2(2) TPD52(2) V-SNARE(2)
TargetP:	Mitochondria (Class 5 C0.260; M0.514; S0.021; _0.333)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	255 aa (-cTP 191)
Molecular Weight	28.60 kDA(-cTP )
PI	6.42(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data