PPDB

 The Plant Proteome Database

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AT4G17470.1   alpha/beta-Hydrolases superfamily protein
Lab Annot. palmitoyl protein thioesterase protein
Mapman: 11.9.1 lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17470.4 11Arabidopsis thaliana03081001000 (0)S
AT4G17470.3 11Arabidopsis thaliana030810010019 (15)S
AT4G17470.2 11Arabidopsis thaliana030810010019 (15)S
Os03g01150.1 7Oryza sativa2E-12427857760 (0)S
Os03g01150.2 7Oryza sativa1E-11927856750 (0)S
Os10g41340.1 7Oryza sativa7E-11927755750 (0)S
GRMZM2G093880_P01 3.21Zea mays1E-12429358750 (0)S
Zm00001eb390960_P003 agpv5Zea mays1E-12429358750 (0)S
v1_GRMZM2G374779_P01 4a53Zea mays7E-12329255751 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF676(1) Palm_thioest(1)
TargetP: Secreted (Class 1 C0.008; M0.075; S0.976; _0.018)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 308 aa (-cTP 268)
Molecular Weight 34.19 kDA(-cTP )
PI 5.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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