PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G17330.1   G2484-1 protein
Lab Annot. G2484-1 protein
Mapman: 35.1.2 not assigned.no ontology.agenet domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17330.2 11Arabidopsis thaliana020371001000 (0)_
AT4G17330.3 11Arabidopsis thaliana0203798980 (0)_
AT1G68580.5 11Arabidopsis thaliana1E-1120527430 (0)S
Os10g41030.2 7Oryza sativa3E-96118234499 (9)_
Os10g41030.1 7Oryza sativa2E-95118334499 (9)_
Os10g41030.3 7Oryza sativa4E-6082033482 (2)_
GRMZM2G033478_P01 3.21Zea mays9E-119117934475 (3)_
v1_GRMZM2G033478_P01 4a53Zea mays9E-119117934477 (7)_
Zm00001eb023270_P002 agpv5Zea mays1E-118117934470 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Agenet(2) DUF2073(1) ZirS_C(1)
TargetP: Cytoplasm (Class 2 C0.049; M0.157; S0.039; _0.941)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 2037 aa (-cTP 2022)
Molecular Weight 218.07 kDA(-cTP )
PI 5.17(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help