PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G17280.1 Auxin-responsive family protein

Lab Annot.

Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G47530.1 11 Arabidopsis thaliana 0 380 78 87 0 (0) S
AT5G35735.1 11 Arabidopsis thaliana 9E-126 389 47 66 0 (0) S
AT3G25290.1 11 Arabidopsis thaliana 1E-121 366 49 66 0 (0) S
Os03g09900.1 7 Oryza sativa 1E-118 366 48 65 0 (0) S
Os08g41280.1 7 Oryza sativa 7E-108 362 47 66 26 (26) S
Os09g32470.1 7 Oryza sativa 5E-106 361 46 65 0 (0) S
GRMZM2G003506_P01 3.21 Zea mays 1E-114 369 47 63 0 (0) S
Zm00001eb008200_P001 agpv5 Zea mays 1E-114 369 47 63 0 (0) S
v1_GRMZM2G003506_P01 4a53 Zea mays 1E-114 369 47 63 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alpha_kinase(1) Cytochrom_B561(2) DUF2427(4) DUF4079(1) DUF568(1) Myco_arth_vir_
TargetP:	Secreted (Class 1 C0.013; M0.016; S0.989; _0.025)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	1 TMs
TAT position:
Length	402 aa (-cTP 368)
Molecular Weight	43.68 kDA(-cTP )
PI	9.76(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data