PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G17245.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G47610.1 11 Arabidopsis thaliana 4E-57 155 58 72 0 (0) C
AT1G49220.1 11 Arabidopsis thaliana 1E-28 131 42 56 0 (0) _
AT5G05280.1 11 Arabidopsis thaliana 2E-25 160 34 53 0 (0) _
Os04g34230.1 7 Oryza sativa 3E-27 152 38 55 0 (0) C
Os11g02424.1 7 Oryza sativa 2E-22 163 39 49 0 (0) C
Os02g33720.1 7 Oryza sativa 8E-21 147 33 51 0 (0) _
GRMZM2G059110_P01 3.21 Zea mays 7E-30 136 40 58 0 (0) _
v1_GRMZM2G059110_P01 4a53 Zea mays 7E-30 136 40 58 0 (0) _
v1_GRMZM2G451308_P01 4a53 Zea mays 5E-24 143 37 51 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(
TargetP:	Cytoplasm (Class 2 C0.225; M0.040; S0.019; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	166 aa (-cTP 147)
Molecular Weight	18.30 kDA(-cTP )
PI	6.27(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data