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The Plant Proteome Database

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AT4G17100.1   poly(U)-specific endoribonuclease-B protein

Lab Annot. Endoribonuclease XendoU
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17100.2 11Arabidopsis thaliana0308999956 (4)_
Os04g45910.1 7Oryza sativa4E-171465567219 (19)C
Zm00001eb075030_P001 agpv5Zea mays3E-16847855680 (0)_
Zm00001eb075030_P002 agpv5Zea mays3E-16847855680 (0)_
AC212835.3_FGP007 3.21Zea mays3E-16847855680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: EndoU_bacteria(3) XendoU(2)
TargetP: Cytoplasm (Class 2 C0.241; M0.112; S0.067; _0.862)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 435 aa (-cTP 425)
Molecular Weight 49.53 kDA(-cTP )
PI 4.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2247Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2290Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help