PPDB

The Plant Proteome Database

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AT4G17030.1   expansin-like B1

Lab Annot. expansin-like B1
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G45970.2 11Arabidopsis thaliana4E-4520836550 (0)S
AT4G38400.1 11Arabidopsis thaliana8E-4520336551 (1)S
AT3G45960.2 11Arabidopsis thaliana2E-4320335540 (0)S
Os07g31390.1 7Oryza sativa8E-6024443570 (0)S
Os03g04020.1 7Oryza sativa6E-4422438500 (0)M
Os03g04020.2 7Oryza sativa2E-4320738510 (0)_
GRMZM2G095968_P01 3.21Zea mays4E-4222738510 (0)S
v1_GRMZM2G095968_P01 4a53Zea mays4E-4222738510 (0)S
GRMZM2G095968_P02 3.21Zea mays5E-4123138500 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(1) Expansin_C(1)
TargetP: Secreted (Class 1 C0.004; M0.042; S0.992; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 250 aa (-cTP 219)
Molecular Weight 27.93 kDA(-cTP )
PI 6.64(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help