PPDB

The Plant Proteome Database

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AT4G17010.1   transcription factor IIIB

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g35220.1 7Oryza sativa4E-4314650700 (0)M
Os02g29220.1 7Oryza sativa4E-4014650710 (0)C
Os04g35220.2 7Oryza sativa3E-277660850 (0)M
GRMZM2G330424_P01 3.21Zea mays3E-4114647703 (3)M
Zm00001eb422600_P001 agpv5Zea mays3E-4114647700 (0)M
v1_GRMZM2G330424_P01 4a53Zea mays1E-1710739630 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ABC_tran_CTD(2) CorA(1) DUF2203(2) Thiamine_BP(1)
TargetP: Mitochondria (Class 2 C0.061; M0.827; S0.006; _0.117)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 160 aa (-cTP 142)
Molecular Weight 18.68 kDA(-cTP )
PI 8.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help