PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G16990.1   disease resistance protein (TIR-NBS class)

Lab Annot. disease resistance protein (TIR-NBS class), putative
Mapman: 20.1.2 stress.biotic.receptors
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16990.8 11Arabidopsis thaliana06701001000 (0)_
AT4G16990.11 11Arabidopsis thaliana067199990 (0)_
AT4G16990.6 11Arabidopsis thaliana067199990 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(1) AAA_14(1) AAA_16(1) AAA_18(1) AAA_22(1) ABC_tran(1) ATPase_2(1) BRX(2) NB
TargetP: Cytoplasm (Class 4 C0.254; M0.140; S0.024; _0.609)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 670 aa (-cTP 649)
Molecular Weight 76.46 kDA(-cTP )
PI 8.41(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help