PPDB

The Plant Proteome Database

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AT4G16670.1   auxin canalization protein (DUF828)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16670.2 11Arabidopsis thaliana03511001000 (0)_
AT4G16670.3 11Arabidopsis thaliana038092920 (0)_
AT4G17350.1 11Arabidopsis thaliana4E-11137952670 (0)_
Os02g44040.1 7Oryza sativa6E-7039339580 (0)M
Os10g41060.1 7Oryza sativa5E-5938240600 (0)_
Os03g43510.1 7Oryza sativa2E-2725035550 (0)_
Zm00001eb186550_P001 agpv5Zea mays3E-5940341590 (0)_
v1_GRMZM2G027052_P01 4a53Zea mays3E-5940341591 (1)_
GRMZM2G027052_P01 3.21Zea mays3E-5740540591 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auxin_canalis(2) PH(1) PH_11(1) PH_2(1)
TargetP: Cytoplasm (Class 1 C0.104; M0.085; S0.024; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 429 aa (-cTP 346)
Molecular Weight 46.31 kDA(-cTP )
PI 6.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help