PPDB

PPDB	The Plant Proteome Database

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AT4G16630.1 DEA(D/H)-box RNA helicase family protein

Lab Annot.

DEAD box RNA helicase (RH28)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G60990.1 11 Arabidopsis thaliana 1E-76 379 37 55 1 (1) _
AT1G16280.1 11 Arabidopsis thaliana 5E-76 407 38 55 0 (0) _
AT1G31970.1 11 Arabidopsis thaliana 2E-64 367 38 57 2 (2) _
Os12g29660.1 7 Oryza sativa 0 615 69 83 4 (4) _
Os03g46610.1 7 Oryza sativa 1E-77 381 39 56 1 (1) _
Os03g46610.2 7 Oryza sativa 1E-77 381 39 56 1 (1) _
Zm00001eb102610_P001 agpv5 Zea mays 0 641 67 81 0 (0) _
v1_GRMZM2G420865_P01 4a53 Zea mays 0 638 67 81 11 (11) _
GRMZM2G420865_P01 3.21 Zea mays 0 638 67 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_22(2) ARTD15_N(1) DEAD(1) Helicase_C(2) ResIII(1)
TargetP:	Cytoplasm (Class 2 C0.118; M0.130; S0.130; _0.835)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	789 aa (-cTP 770)
Molecular Weight	89.35 kDA(-cTP )
PI	5.51(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20706207(cell cycle interactome (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data