PPDB

PPDB	The Plant Proteome Database

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AT4G16566.1 histidine triad nucleotide-binding 4

Lab Annot.

histidine triad protein / HIT protein
Mapman: 23 nucleotide metabolism

Curated Location

peroxisome (Pubmed: 21472859 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G16566.3 11 Arabidopsis thaliana 1E-106 145 100 100 0 (0) _
AT4G16566.2 11 Arabidopsis thaliana 2E-106 145 100 100 0 (0) _
Os04g45280.2 7 Oryza sativa 7E-63 143 65 79 0 (0) M
Os04g45280.1 7 Oryza sativa 7E-63 143 65 79 0 (0) M
Os04g45280.4 7 Oryza sativa 6E-59 121 70 83 0 (0) M
GRMZM2G155341_P03 3.21 Zea mays 2E-62 139 62 79 0 (0) M
v1_GRMZM2G155341_P03 4a53 Zea mays 2E-62 139 62 79 0 (0) M
Zm00001eb427450_P002 agpv5 Zea mays 2E-62 139 62 79 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DcpS_C(1) HIT(1)
TargetP:	Cytoplasm (Class 3 C0.148; M0.157; S0.126; _0.577)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	173 aa (-cTP 163)
Molecular Weight	19.85 kDA(-cTP )
PI	8.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))

Comparative Proteomics Data