PPDB

The Plant Proteome Database

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AT4G16520.1   Ubiquitin-like superfamily protein

Lab Annot. ATG8f - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16520.2 11Arabidopsis thaliana2E-841211001001 (1)_
AT3G60640.1 11Arabidopsis thaliana1E-6911782930 (0)_
AT2G45170.1 11Arabidopsis thaliana1E-68117849216 (15)_
Os08g09240.2 7Oryza sativa2E-6911883910 (0)_
Os08g09240.1 7Oryza sativa2E-6911883910 (0)_
Os04g53240.1 7Oryza sativa1E-6711882890 (0)_
Zm00001eb171400_P002 agpv5Zea mays8E-6911883900 (0)_
Zm00001eb171400_P003 agpv5Zea mays8E-6911883900 (0)_
GRMZM2G134613_P02 3.21Zea mays9E-69118839018 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG12(1) Atg8(1)
TargetP: Cytoplasm (Class 2 C0.040; M0.218; S0.045; _0.851)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 121 aa (-cTP 51)
Molecular Weight 13.76 kDA(-cTP )
PI 8.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2254Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help