PPDB

The Plant Proteome Database

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AT4G16430.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46510.1 11Arabidopsis thaliana4E-9254634540 (0)_
AT1G01260.3 11Arabidopsis thaliana4E-4821743641 (1)_
AT1G01260.2 11Arabidopsis thaliana4E-4821743641 (1)_
Os01g50940.1 7Oryza sativa2E-6948536540 (0)_
Os01g13460.1 7Oryza sativa3E-4216453680 (0)_
Os10g42430.1 7Oryza sativa1E-3616843662 (2)_
v1_GRMZM2G159937_P01 4a53Zea mays7E-7148134510 (0)_
Zm00001eb155410_P001 agpv5Zea mays7E-7148134510 (0)_
GRMZM2G159937_P01 3.21Zea mays7E-7148134510 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: bHLH-MYC_N(2) HLH(1) Mu-like_Pro(1)
TargetP: Cytoplasm (Class 2 C0.172; M0.075; S0.032; _0.859)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 467 aa (-cTP 409)
Molecular Weight 52.23 kDA(-cTP )
PI 6.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help