PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G16360.2   5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

Lab Annot. 5'-AMP-activated protein kinase beta-2 subunit protein
Mapman: 30.1.1 signalling.in sugar and nutrient physiology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.10)
Links TAIR   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16360.1 11Arabidopsis thaliana025999990 (0)_
AT4G16360.3 10Arabidopsis thaliana025999990 (0)C
AT5G21170.1 11Arabidopsis thaliana6E-7422951680 (0)C
Os05g41220.1 7Oryza sativa6E-7323149670 (0)_
Os03g20340.1 7Oryza sativa1E-6223447672 (2)_
Os07g48790.1 7Oryza sativa2E-5724242600 (0)_
Zm00001eb352470_P002 agpv5Zea mays1E-7123149670 (0)C
GRMZM2G025459_P01 3.21Zea mays6E-7123149670 (0)C
Zm00001eb352470_P001 agpv5Zea mays6E-7123149670 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AMPKBI(1)
TargetP: Chloroplast (Class 2 C0.860; M0.064; S0.045; _0.224)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 233)
Molecular Weight 28.66 kDA(-cTP 26.11)
PI 5.68(-cTP 5.62)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help