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PPDB	The Plant Proteome Database

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AT4G16250.1 phytochrome D

Lab Annot.

Mapman: 30.11 signalling.light

Curated Location

TAIR curated location: nucleus15753105

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G18790.1 11 Arabidopsis thaliana 0 1163 81 88 1 (1) C
AT2G18790.2 11 Arabidopsis thaliana 0 1080 81 89 0 (0) C
AT4G18130.1 11 Arabidopsis thaliana 0 1135 54 70 0 (0) _
Os03g19590.1 7 Oryza sativa 0 1153 70 82 0 (0) M
Os03g54084.1 7 Oryza sativa 0 1124 52 69 0 (0) M
Os03g51030.1 7 Oryza sativa 0 1110 50 68 0 (0) M
GRMZM2G124532_P03 3.21 Zea mays 0 1116 71 83 4 (3) C
Zm00001eb014850_P001 agpv5 Zea mays 0 1116 71 83 0 (0) C
GRMZM2G092174_P01 3.21 Zea mays 0 1108 70 83 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GAF(1) HATPase_c(1) HATPase_c_5(2) HisKA(2) PAS(2) PAS_2(2) PAS_3(2) PAS_4(2) PA
TargetP:	Chloroplast (Class 3 C0.771; M0.320; S0.018; _0.092)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1164 aa (-cTP 1138)
Molecular Weight	129.27 kDA(-cTP 126.74)
PI	5.81(-cTP 5.64)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data