PPDB

The Plant Proteome Database

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AT4G16190.1   Papain family cysteine protease

Lab Annot. papain-like cysteine protease (RD19C) (RESPONSIVE TO DEHYDRATION 19C)
Mapman: 29.5.3.1.1* protein.degradation.cysteine protease.CA.C1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G39090.1 11Arabidopsis thaliana0368698132 (17)S
AT2G21430.1 11Arabidopsis thaliana3E-18033271840 (0)S
AT3G54940.2 11Arabidopsis thaliana6E-13933857720 (0)S
Os02g27030.1 7Oryza sativa2E-17434568806 (6)S
Os04g24600.1 7Oryza sativa1E-16934467780 (0)S
Os07g29760.1 7Oryza sativa1E-11635351650 (0)S
Zm00001eb240700_P002 agpv5Zea mays2E-17134368780 (0)S
Zm00001eb240700_P001 agpv5Zea mays2E-17134368780 (0)S
v1_GRMZM2G098298_P01 4a53Zea mays2E-17134368783 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3644(1) Inhibitor_I29(1) Peptidase_C1(1) Peptidase_C1_2(3)
TargetP: Secreted (Class 1 C0.009; M0.044; S0.962; _0.120)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 373 aa (-cTP 362)
Molecular Weight 41.26 kDA(-cTP )
PI 6.50(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2250Detail       seedlings [A. thaliana] total tissue atg5
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19200160(flower-stage 12)
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21325567(root-proteome (wt & det3))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help