PPDB

The Plant Proteome Database

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AT4G16180.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16180.2 11Arabidopsis thaliana027310010011 (11)S
Os03g19690.1 7Oryza sativa4E-111243648025 (25)S
Os03g19690.2 7Oryza sativa5E-106243627823 (23)S
GRMZM2G135968_P01 3.21Zea mays5E-118258628014 (14)S
v1_GRMZM2G135968_P01 4a53Zea mays5E-118258628011 (10)S
Zm00001eb014900_P001 agpv5Zea mays5E-11825862800 (0)S

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Secreted (Class 3 C0.025; M0.041; S0.635; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 273 aa (-cTP 269)
Molecular Weight 30.62 kDA(-cTP )
PI 5.31(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help