PPDB

PPDB	The Plant Proteome Database

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AT4G16120.1 COBRA-like protein-7 precursor

Lab Annot.

ATSEB1
Mapman: 15 metal handling

Curated Location

TAIR curated location: anchored to membrane0012376623,12068095,12805595

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G16860.1 11 Arabidopsis thaliana 0 662 73 85 0 (0) S
AT5G49270.1 11 Arabidopsis thaliana 0 624 66 78 0 (0) S
AT3G20580.1 11 Arabidopsis thaliana 0 627 53 70 0 (0) S
Os03g18910.1 7 Oryza sativa 0 616 53 69 0 (0) S
Os06g47110.1 7 Oryza sativa 0 600 52 70 0 (0) S
Os07g49080.1 7 Oryza sativa 0 615 50 66 0 (0) S
v1_GRMZM2G353276_P01 4a53 Zea mays 0 630 51 67 0 (0) S
GRMZM2G353276_P01 3.21 Zea mays 0 630 51 67 0 (0) S
v1_GRMZM2G377215_P01 4a53 Zea mays 0 634 53 68 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBM_2(4) COBRA(2)
TargetP:	Secreted (Class 2 C0.160; M0.007; S0.904; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	661 aa (-cTP 636)
Molecular Weight	72.60 kDA(-cTP )
PI	7.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
16618929(Golgi)
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)
22430844(Golgi-cell-culture)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data