PPDB

PPDB	The Plant Proteome Database

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AT4G15975.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G16720.1 11 Arabidopsis thaliana 6E-57 225 49 65 0 (0) _
AT3G62690.1 11 Arabidopsis thaliana 9E-29 132 43 62 0 (0) _
AT2G42360.1 11 Arabidopsis thaliana 8E-27 126 42 57 0 (0) _
Os06g09310.1 7 Oryza sativa 3E-24 132 40 60 0 (0) _
Os06g48065.1 7 Oryza sativa 3E-20 74 45 74 0 (0) _
Os03g05570.1 7 Oryza sativa 3E-20 113 37 60 0 (0) _
GRMZM2G416750_P01 3.21 Zea mays 4E-23 160 35 52 0 (0) _
v1_GRMZM2G416750_P01 4a53 Zea mays 4E-23 160 35 52 0 (0) _
v1_GRMZM2G478553_P01 4a53 Zea mays 3E-21 125 40 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) CarbpepA_inh(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) R
TargetP:	Secreted (Class 3 C0.001; M0.205; S0.771; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	235 aa (-cTP 156)
Molecular Weight	26.34 kDA(-cTP )
PI	5.31(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data