PPDB

The Plant Proteome Database

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AT4G15880.1   Cysteine proteinases superfamily protein

Lab Annot. SUMO isopeptidase - EARLY IN SHORT DAYS 4 (ESD4)
Mapman: 29.5.3.3.1* protein.degradation.cysteine protease.CE.C48
Curated Location nucleus

TAIR curated location: nucleus14507998
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15880.2 11Arabidopsis thaliana04101001000 (0)C
AT3G06910.1 11Arabidopsis thaliana7E-14446249660 (0)_
AT4G00690.1 11Arabidopsis thaliana5E-12624670810 (0)C
Os01g25370.1 7Oryza sativa1E-11028857740 (0)M
Os03g22400.1 7Oryza sativa2E-10328256720 (0)M
Os03g29630.1 7Oryza sativa2E-9723858740 (0)_
Zm00001eb341180_P002 agpv5Zea mays1E-11828761770 (0)_
GRMZM2G012601_P01 3.21Zea mays1E-11828761770 (0)_
v1_GRMZM2G012601_P03 4a53Zea mays1E-11828761770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_C48(2)
TargetP: Chloroplast (Class 3 C0.793; M0.220; S0.008; _0.125)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 489 aa (-cTP 456)
Molecular Weight 56.43 kDA(-cTP 52.61)
PI 7.54(-cTP 6.73)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help