PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G15870.1   terpene synthase 1
Lab Annot.
Mapman: 16.1.5 secondary metabolism.isoprenoids.terpenoids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G23230.2 11Arabidopsis thaliana059256720 (0)C
AT2G23230.1 11Arabidopsis thaliana059255710 (0)C
AT4G20230.2 11Arabidopsis thaliana061149690 (0)C
Os04g27400.1 7Oryza sativa7E-7148732540 (0)_
Os01g23530.1 7Oryza sativa3E-6255328470 (0)_
Os04g27790.1 7Oryza sativa4E-6255526480 (0)C
Zm00001eb374210_P001 agpv5Zea mays4E-7755830530 (0)C
v1_GRMZM2G177098_P02 4a53Zea mays5E-7755830530 (0)C
GRMZM2G177098_P02 3.21Zea mays5E-7755830533 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANTAR(2) DUF2096(2) Terpene_syn_C_2(2) Terpene_synth(1) Terpene_synth_C(1)
TargetP: Chloroplast (Class 3 C0.747; M0.044; S0.170; _0.017)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 598 aa (-cTP 540) (-lTP 503)
Molecular Weight 69.62 kDA(-cTP 63.17)(-lTP 58.93)
PI 5.66(-cTP 5.16)(-lTP 5.006)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1871Detail       Total leaf [A. thaliana] Stroma wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help