PPDB

The Plant Proteome Database

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AT4G15850.1   RNA helicase 1

Lab Annot. DExD box RNA helicase (RH01)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16630.1 11Arabidopsis thaliana1E-4742730480 (0)_
AT5G60990.1 11Arabidopsis thaliana1E-4645330451 (1)_
AT5G26742.1 11Arabidopsis thaliana7E-394692846723 (590)C
Os02g55260.2 7Oryza sativa048659750 (0)_
Os02g55260.1 7Oryza sativa048659750 (0)_
Os07g46580.1 7Oryza sativa6E-5144030470 (0)_
Zm00001eb257820_P001 agpv5Zea mays050157720 (0)_
Zm00001eb257820_P002 agpv5Zea mays050157720 (0)_
v1_GRMZM2G030873_P01 4a53Zea mays050157723 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEAD(2) Helicase_C(1) ResIII(1)
TargetP: Cytoplasm (Class 1 C0.078; M0.025; S0.056; _0.963)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 522 aa (-cTP 499)
Molecular Weight 57.72 kDA(-cTP )
PI 9.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help