PPDB

 The Plant Proteome Database

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AT4G15802.1   heat shock factor binding protein
Lab Annot. heat shock factor binding protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os09g20830.2 6Oryza sativa3E-258259790 (0)_
Os09g20830.1 6Oryza sativa2E-219551680 (0)_
Os09g20830.5 7Oryza sativa5E-103764860 (0)_
GRMZM2G065355_P01 3.21Zea mays2E-298365803 (3)_
v1_GRMZM2G065355_P01 4a53Zea mays2E-298365803 (3)_
Zm00001eb098770_P001 agpv5Zea mays4E-268263790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Baculo_PEP_C(1) BLOC1_2(1) CLZ(1) Crescentin(1) DUF1664(1) FtsK_SpoIIIE(1) HBM(1
TargetP: Cytoplasm (Class 2 C0.108; M0.120; S0.125; _0.882)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 86 aa (-cTP 26)
Molecular Weight 9.35 kDA(-cTP )
PI 4.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1420Detail        [A. thaliana]  
1427Detail        [A. thaliana] total leaf tissue 1.11 wild-type
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1596Detail        [A. thaliana]  
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2317Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
22430844(Golgi-cell-culture)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help