PPDB

The Plant Proteome Database

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AT4G15630.1   Uncharacterized protein family (UPF0497)

Lab Annot. unknown membrane protein
Mapman: 35.1 not assigned.no ontology
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15620.1 11Arabidopsis thaliana5E-11219081921 (1)_
AT4G15610.1 11Arabidopsis thaliana2E-1817930511 (1)_
AT4G20390.1 11Arabidopsis thaliana5E-1517431540 (0)M
Os07g26110.1 7Oryza sativa3E-2419734500 (0)_
Os01g26120.1 7Oryza sativa6E-2413441570 (0)_
Os12g41690.1 7Oryza sativa1E-1917430530 (0)_
Zm00001eb131630_P001 agpv5Zea mays5E-3616540640 (0)_
v1_GRMZM2G104639_P01 4a53Zea mays5E-3616540641 (1)_
GRMZM2G104639_P01 3.21Zea mays5E-3616540641 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF588(1) MARVEL(1)
TargetP: Cytoplasm (Class 1 C0.061; M0.042; S0.009; _0.988)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 190 aa (-cTP 105)
Molecular Weight 20.11 kDA(-cTP )
PI 9.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)

Comparative Proteomics Data


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