PPDB

The Plant Proteome Database

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AT4G15420.1   Ubiquitin fusion degradation UFD1 family protein

Lab Annot.
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15420.2 11Arabidopsis thaliana05611001000 (0)_
AT2G29070.2 11Arabidopsis thaliana6E-2818838590 (0)_
AT2G21270.4 11Arabidopsis thaliana1E-2716240580 (0)_
Os01g35040.1 7Oryza sativa057061760 (0)_
Os02g08480.1 7Oryza sativa2E-27161405710 (10)_
Os04g48770.1 6Oryza sativa3E-2416237560 (0)_
Zm00001eb341970_P001 agpv5Zea mays056960750 (0)_
GRMZM2G053574_P01 3.21Zea mays056960751 (1)_
v1_GRMZM2G053574_P01 4a53Zea mays056960751 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Big_3_3(1) PPC(1) UFD1(1) VATC(4) zf-TRAF(4) zf_UBZ(3)
TargetP: Cytoplasm (Class 2 C0.198; M0.122; S0.025; _0.857)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 561 aa (-cTP 555)
Molecular Weight 62.45 kDA(-cTP )
PI 6.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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