PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G15390.1   HXXXD-type acyl-transferase family protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15390.2 11Arabidopsis thaliana04461001000 (0)_
AT3G30280.1 11Arabidopsis thaliana044577861 (1)_
AT5G47950.1 11Arabidopsis thaliana044260770 (0)_
Os02g39850.1 7Oryza sativa5E-30470244311 (11)M
Os04g42250.2 7Oryza sativa3E-2745623420 (0)M
Os04g42250.4 7Oryza sativa3E-2745623420 (0)M
v1_GRMZM2G035584_P07 4a53Zea mays1E-28473244312 (12)_
GRMZM2G035584_P01 3.21Zea mays1E-28473244316 (16)_
GRMZM2G035584_P03 3.21Zea mays1E-28473244316 (16)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Transferase(1)
TargetP: Cytoplasm (Class 2 C0.159; M0.049; S0.117; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 446 aa (-cTP 442)
Molecular Weight 48.77 kDA(-cTP )
PI 5.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 20405473(roots - TRX-y interacting proteins)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help