PPDB

The Plant Proteome Database

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AT4G15165.1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein

Lab Annot. 20S proteasome alpha subunit C-like (PAC1-like) (name by KJW)
Mapman: 29.5.11.20.1* protein.degradation.ubiquitin.proteasome.20S
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22110.1 11Arabidopsis thaliana2E-1372507782268 (152)M
AT3G14290.1 11Arabidopsis thaliana6E-352383252171 (84)_
AT1G53850.1 11Arabidopsis thaliana1E-342383152194 (103)_
Os06g07878.1 7Oryza sativa2E-113249667415 (15)M
Os06g07978.1 7Oryza sativa2E-113249667415 (15)M
Os06g07140.1 7Oryza sativa2E-113249667419 (19)M
Zm00001eb375510_P002 agpv5Zea mays5E-11624969750 (0)M
GRMZM2G005080_P01 3.21Zea mays5E-116249697523 (20)M
v1_GRMZM2G005080_P01 4a53Zea mays5E-116249697526 (25)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Proteasome(2) Proteasome_A_N(1)
TargetP: Cytoplasm (Class 5 C0.011; M0.700; S0.036; _0.716)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 208 aa (-cTP 186)
Molecular Weight 22.73 kDA(-cTP )
PI 6.96(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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