PPDB

The Plant Proteome Database

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AT4G15093.1   catalytic LigB subunit of aromatic ring-opening dioxygenase family

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g65680.1 7Oryza sativa6E-11126658760 (0)M
Os01g65690.1 7Oryza sativa2E-109269577619 (19)_
Os01g65690.2 7Oryza sativa2E-7719559780 (0)_
Zm00001eb145870_P001 agpv5Zea mays6E-12126663770 (0)M
GRMZM2G078500_P01 3.21Zea mays6E-121266637722 (22)M
v1_GRMZM2G078500_P01 4a53Zea mays6E-121266637717 (17)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LigB(1)
TargetP: Cytoplasm (Class 3 C0.249; M0.068; S0.062; _0.718)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 269 aa (-cTP 223)
Molecular Weight 30.25 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help