PPDB

The Plant Proteome Database

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AT4G15020.1   hAT transposon superfamily

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15020.2 11Arabidopsis thaliana07681001003 (1)_
AT3G22220.4 11Arabidopsis thaliana077472840 (0)_
AT3G22220.1 11Arabidopsis thaliana077472841 (1)_
Os03g60800.1 7Oryza sativa2E-16055745620 (0)_
Os09g32380.1 7Oryza sativa3E-12572735510 (0)_
Os12g35120.1 7Oryza sativa6E-9169432490 (0)_
GRMZM2G362557_P01 3.21Zea mays6E-7566928460 (0)_
v1_GRMZM2G046753_P01 4a53Zea mays9E-7248431510 (0)_
v1_GRMZM2G386025_P01 4a53Zea mays3E-3331931500 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Dimer_Tnp_hAT(1) DUF659(1) zf-BED(1)
TargetP: Cytoplasm (Class 2 C0.072; M0.142; S0.033; _0.939)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 768 aa (-cTP 684)
Molecular Weight 86.64 kDA(-cTP )
PI 5.58(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help