PPDB

 The Plant Proteome Database

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AT4G14890.1   2Fe-2S ferredoxin-like superfamily protein
Lab Annot. FdC2
Mapman: 26.3 misc.other Ferredoxins and Rieske domain
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G27510.1 11Arabidopsis thaliana3E-2310244600 (0)C
AT1G60950.1 11Arabidopsis thaliana7E-18102405978 (57)C
AT5G10000.1 11Arabidopsis thaliana8E-1812235560 (0)C
Os03g45710.1 7Oryza sativa3E-49134597126 (26)C
Os01g64120.1 7Oryza sativa5E-2516636480 (0)C
Os03g61960.1 7Oryza sativa1E-179443559 (9)C
v1_GRMZM2G359127_P01 4a53Zea mays9E-55151587267 (67)C
GRMZM2G359127_P01 3.21Zea mays9E-55151587284 (77)C
Zm00001eb052650_P001 agpv5Zea mays9E-5515158720 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Fer2(1)
TargetP: Chloroplast (Class 2 C0.888; M0.150; S0.030; _0.056)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 154 aa (-cTP 98)
Molecular Weight 16.73 kDA(-cTP 10.52)
PI 4.74(-cTP 4.07)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
326Detail       leaf [A. thaliana] chloroplast stromawild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1351Detail       leaf [A. thaliana] total tissue t1-t2
1352Detail       leaf [A. thaliana] total tissue Prep1_Prep2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1354Detail       leaf [A. thaliana] total tissue wild-type
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1596Detail        [A. thaliana]  
1637Detail       leaf [A. thaliana] total leaf tissue stromaWild-type
1638Detail       leaf [A. thaliana] total leaf tissue stromaWild-type
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1640Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2114Detail       leaf [A. thaliana] Stroma stromawt
2115Detail       leaf [A. thaliana] Stroma stromacGep
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19888209(80S polysomal fraction)
19888209(leaves)
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data

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