PPDB

The Plant Proteome Database

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AT4G14660.1   RNA polymerase Rpb7-like%2C N-terminal domain-containing protein

Lab Annot. RNA polymerase Rpb7-like
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G14660.2 11Arabidopsis thaliana5E-1301781001000 (0)_
AT4G14660.3 11Arabidopsis thaliana5E-1301781001000 (0)_
AT3G22900.1 11Arabidopsis thaliana8E-7817561800 (0)_
Os05g06490.1 7Oryza sativa4E-6517552761 (1)S
Os05g13770.1 7Oryza sativa8E-4714653760 (0)S
Os05g33240.1 7Oryza sativa2E-1717929541 (1)M
v1_GRMZM2G040702_P04 4a53Zea mays8E-6417550750 (0)_
v1_GRMZM2G040702_P02 4a53Zea mays8E-6417550750 (0)_
GRMZM2G040702_P04 3.21Zea mays8E-6417550751 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_Rbc25(1) S1(2) SHS2_Rpb7-N(2)
TargetP: Cytoplasm (Class 5 C0.043; M0.146; S0.467; _0.491)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 178 aa (-cTP 143)
Molecular Weight 20.26 kDA(-cTP )
PI 6.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help