PPDB

The Plant Proteome Database

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AT4G14605.1   Mitochondrial transcription termination factor family protein

Lab Annot. mTERF domain protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location plastid (Pubmed: 23198870 21464319 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G14605.2 11Arabidopsis thaliana04931001000 (0)C
AT2G34620.1 11Arabidopsis thaliana2E-27219355415 (12)C
AT2G21710.1 11Arabidopsis thaliana4E-2728426510 (0)_
Os02g39040.1 7Oryza sativa7E-17441756780 (0)C
Os08g40430.1 7Oryza sativa2E-2831926490 (0)_
Os05g33500.1 7Oryza sativa6E-2631325455 (5)C
Zm00001eb246440_P001 agpv5Zea mays2E-16742854760 (0)C
v1_GRMZM2G024550_P01 4a53Zea mays2E-167428547611 (11)C
GRMZM2G024550_P01 3.21Zea mays2E-167428547618 (18)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HHH_4(3) mTERF(3) Spo16(2)
TargetP: Chloroplast (Class 5 C0.438; M0.316; S0.008; _0.245)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 493 aa (-cTP 450)
Molecular Weight 55.96 kDA(-cTP 50.98)
PI 9.21(-cTP 8.89)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
2290Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help