PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G14600.1   Target SNARE coiled-coil domain protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G29060.1 11Arabidopsis thaliana2E-7913791940 (0)M
AT1G29060.2 11Arabidopsis thaliana2E-519393970 (0)_
Os07g38990.1 7Oryza sativa1E-5012062800 (0)_
Os03g08870.1 7Oryza sativa2E-4412355780 (0)_
GRMZM2G063420_P01 3.21Zea mays2E-5112164790 (0)_
v1_GRMZM2G063420_P01 4a53Zea mays2E-5112164790 (0)_
Zm00001eb325480_P001 agpv5Zea mays2E-5112164790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AI-2E_transport(1) DASH_Dam1(1) Erf4(1) SlyX(2)
TargetP: Mitochondria (Class 3 C0.217; M0.688; S0.028; _0.139)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 137 aa (-cTP 107)
Molecular Weight 15.38 kDA(-cTP )
PI 9.69(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
18436743(specific to roots)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help