PPDB

The Plant Proteome Database

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AT4G14510.1   CRM family member 3B

Lab Annot. CFM3b splice factor
Mapman: 27.1.1 RNA.processing.splicing
Curated Location plastid stroma (Pubmed: 23198870 18799595 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23070.1 11Arabidopsis thaliana0910637522 (21)C
AT4G29750.1 11Arabidopsis thaliana066046652 (2)C
AT4G29750.2 11Arabidopsis thaliana1E-17963246650 (0)C
Os11g37990.1 7Oryza sativa068953684 (4)C
Os09g19850.1 7Oryza sativa066846650 (0)C
Os05g47850.1 7Oryza sativa4E-153661415917 (17)C
GRMZM2G436001_P02 3.21Zea mays0797506537 (37)C
v1_GRMZM2G436001_P02 4a53Zea mays0797506522 (22)C
Zm00001eb114780_P001 agpv5Zea mays079750650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CRS1_YhbY(4)
TargetP: Chloroplast (Class 2 C0.916; M0.008; S0.004; _0.283)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 907 aa (-cTP 848)
Molecular Weight 102.03 kDA(-cTP 95.49)
PI 5.96(-cTP 5.51)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
292Detail       leaf [Zea Mays] plastid stroma 
542Detail       leaf [A. thaliana] stroma (FPLC) >500 kDa (HMB) wild-type
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help