PPDB

The Plant Proteome Database

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AT4G14420.1   HR-like lesion-inducing protein-like protein

Lab Annot. lesion inducing protein-related
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04340.1 11Arabidopsis thaliana7E-5415855701 (1)S
AT5G43460.1 11Arabidopsis thaliana3E-49157526615 (15)S
AT5G43460.2 11Arabidopsis thaliana3E-4915752660 (0)S
Os04g10240.1 7Oryza sativa1E-58160557410 (10)S
Os03g05520.1 7Oryza sativa7E-58158607723 (23)S
Os10g30860.1 7Oryza sativa4E-49135567622 (22)S
GRMZM2G157354_P03 3.21Zea mays2E-5315654712 (2)S
Zm00001eb419550_P002 agpv5Zea mays2E-5315654710 (0)S
v1_GRMZM2G157354_P01 4a53Zea mays1E-5215654713 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DoxX(2) HR_lesion(1) YrhK(2)
TargetP: Secreted (Class 3 C0.004; M0.027; S0.817; _0.301)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 158 aa (-cTP 92)
Molecular Weight 17.43 kDA(-cTP )
PI 9.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
19334764(plasma membrane (cell culture))
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


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