PPDB

The Plant Proteome Database

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AT4G14342.1   Splicing factor 3B subunit 5/RDS3 complex subunit 10

Lab Annot. pre-mRNA splicing factor 10 kDa subunit, putative
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23325.1 11Arabidopsis thaliana4E-618797982 (0)_
AT4G14342.2 11Arabidopsis thaliana2E-528095950 (0)_
Os08g34480.1 7Oryza sativa3E-4873941001 (1)_
GRMZM2G106574_P01 3.21Zea mays1E-60879610016 (15)_
v1_GRMZM2G121942_P01 4a53Zea mays1E-60879610011 (11)_
GRMZM2G121942_P02 3.21Zea mays1E-60879610016 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SF3b10(1)
TargetP: Cytoplasm (Class 3 C0.077; M0.281; S0.097; _0.736)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 87 aa (-cTP 70)
Molecular Weight 10.16 kDA(-cTP )
PI 5.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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