PPDB

 The Plant Proteome Database

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AT4G14300.1   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot. heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G14300.2 11Arabidopsis thaliana04111001000 (0)_
AT2G33410.1 11Arabidopsis thaliana2E-116394607019 (10)_
AT5G55550.5 11Arabidopsis thaliana3E-7920156780 (0)_
Os10g33230.1 7Oryza sativa8E-90253597022 (22)_
Os07g39560.3 7Oryza sativa9E-8143841540 (0)_
Os07g39560.1 7Oryza sativa9E-8143841540 (0)_
Zm00001eb222000_P005 agpv5Zea mays5E-9224062730 (0)_
Zm00001eb222000_P002 agpv5Zea mays5E-9224062730 (0)_
GRMZM2G167505_P03 3.21Zea mays5E-92240627314 (14)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Nup35_RRM_2(2) OB_RNB(2) PHM7_cyt(4) RRM_1(2) RRM_7(2)
TargetP: Cytoplasm (Class 1 C0.092; M0.115; S0.036; _0.932)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 411 aa (-cTP 332)
Molecular Weight 42.35 kDA(-cTP )
PI 5.57(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data

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