PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G14220.1 RING-H2 group F1A

Lab Annot.

RING-H2 group F1A
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G22000.3 11 Arabidopsis thaliana 1E-50 320 39 54 3 (3) _
AT5G22000.1 11 Arabidopsis thaliana 1E-50 320 39 54 3 (3) _
AT5G22000.2 11 Arabidopsis thaliana 1E-50 320 39 54 3 (3) _
Os11g36430.3 7 Oryza sativa 3E-54 329 38 54 0 (0) _
Os11g36430.1 7 Oryza sativa 3E-54 329 38 54 0 (0) _
Os03g57500.1 7 Oryza sativa 3E-51 324 37 54 0 (0) _
v1_GRMZM2G119930_P02 4a53 Zea mays 3E-52 328 39 54 0 (0) _
v1_GRMZM2G119930_P03 4a53 Zea mays 3E-52 328 39 54 0 (0) _
v1_GRMZM2G119930_P01 4a53 Zea mays 3E-52 328 39 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(2) Nab1(1) Prok-RING_1(2) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1) zf-C3HC
TargetP:	Chloroplast (Class 4 C0.530; M0.157; S0.213; _0.208)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	371 aa (-cTP 337)
Molecular Weight	40.28 kDA(-cTP 36.81)
PI	6.89(-cTP 7.33)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1872	Detail								Total leaf [A. thaliana]	Stroma	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)

Comparative Proteomics Data