PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G14180.1   putative recombination initiation defect 1

Lab Annot. ATPRD1 protein binding / protein homodimerization
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G14180.2 11Arabidopsis thaliana0133098980 (0)C
Os04g28020.1 7Oryza sativa3E-7333742610 (0)_
Zm00001eb389920_P002 agpv5Zea mays0102638580 (0)S
Zm00001eb389920_P001 agpv5Zea mays0102638580 (0)S
Zm00001eb389920_P005 agpv5Zea mays0102638580 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 7tm_1(1)
TargetP: Chloroplast (Class 5 C0.326; M0.099; S0.085; _0.305)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon: 3 TMs
TAT position:
Length 1330 aa (-cTP 1299) (-lTP 1190)
Molecular Weight 149.13 kDA(-cTP 145.58)(-lTP 133.65)
PI 5.18(-cTP 5.17)(-lTP 5.138)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help